Frequently Asked Qestions
This section will cover most of the questions you may have about GAMBLR.viz. If there is something that is not covered, please feel free to reach out to us via GitHub by reporting an issue and we will be happy to add it to this page.
Where can I get example data that works with this package?
The example data of all types is available with one of GAMBLR.viz dependencies (GAMBLR.data). Every function demonstrates how to get this data in it’s example, or is already setup to automatically retreive it for you with minimal information (e.g. sample_id).
Can I use my own colors and not the ones the package offers?
Absolutely! Most functions will accept argument custom_colours where list of color mappings can be used to specify your own pallette.
Can I use my own data we generated in our lab?
Absolutely! Most functions will accept metadata and data frame with mutations as input, so you can provide any outside data as long as the formatting is consistent with the example data.