Binary classification of cancer samples from gene expression data

PRPS1

Infering clustered mutations from many cancer genomes

Rainstorm/Doppler2

Error suppression and variant calling from duplex sequencing libraries

Dellingr3

Cancer Genomics Toolkit for Galaxy

tools_morinlab4

Read and somatic variant simulator

JARS

Publications using this software

  1. Double-Hit Gene Expression Signature Defines a Distinct Subgroup of Germinal Center B-Cell-Like Diffuse Large B-Cell Lymphoma
  2. Genome-wide discovery of somatic regulatory variants in diffuse large B-cell lymphoma
  3. Targeted error-suppressed quantification of circulating tumor DNA using semi-degenerate barcoded adapters and biotinylated baits
  4. Enhancing knowledge discovery from cancer genomics data with Galaxy

Data Sets

Contributors